Richard Owczarzy
Nucleic acid biophysics
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Publications
Extinction coefficient
Melting temperature
Biophysics links
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Links to biophysics of nucleic acids
THERMODYNAMIC CALCULATORS
IDT Biophysics calculators
IDT SciTools
Nano, quantum, thermodynamic values
NIST chemical and physical databases
DINAMelt web server
mfold version 3.1
DNA origami software
RNATOPS-W: RNA pseudoknot search in genomes
PseudoViewer of RNA pseudoknots
MOLECULAR BIOLOGY DATABASES
RTPrimerDB - Real-time PCR primers and probes
AOBase - antisense oligonucleotides
miRBase - microRNA sequences
SELEX experiments to bind transcription factors
DNA and RNA aptamer database
Tandem repeats database
Synthetic gene database
SpliceAid - RNA motifs bound by splicing proteins
DNA, RNA, PROTEIN STRUCTURE AND THERMODYNAMICS
OBRC-Database of bioinformatics databases and tools
NTDB-Thermodynamic database for nucleic acids
NDB - Nucleic acid database of 3D structures
Structural classification of RNA
RNA modification database
European ribosomal RNA database
Non-canonical RNA base pair database
Amino acid-nucleotide interaction database
MeRNA - metal ion binding RNA sites
ProNIT - Thermodynamics of protein-nucleic acid interactions
BIPA-Biological Interaction database for Protein-nucleic Acid
PPD - Protein pKa
BindingDB - binding of biomolecules and synthetic compounds
MISCELLANEOUS LINKS
American Society for Biochemistry and Molecular Biology
Biochemical Society
Biophysical Society
Gibbs Society of Biological Thermodynamics
Prof. Albert S. Benight
Prof. Michael Zuker
Biophysics textbook online
HyperPhysics textbook
Copyright 2001-2008, Updated August 28, 2008, version 5.00.